Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 STARP1-201ENST00000397973 869 ntBASIC18.67■□□□□ 0.58
HDAC11Q96DB2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 AC008687.5-201ENST00000593746 558 ntBASIC18.67■□□□□ 0.58
HDAC11Q96DB2 AC006011.2-201ENST00000621313 1158 ntBASIC18.67■□□□□ 0.58
HDAC11Q96DB2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 AC138028.4-201ENST00000564984 1845 ntBASIC18.67■□□□□ 0.58
HDAC11Q96DB2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 SPDYE15P-201ENST00000424157 909 ntBASIC18.66■□□□□ 0.58
HDAC11Q96DB2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.66■□□□□ 0.58
HDAC11Q96DB2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.66■□□□□ 0.58
HDAC11Q96DB2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC11Q96DB2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 FLJ13224-201ENST00000313737 1514 ntBASIC18.65■□□□□ 0.58
HDAC11Q96DB2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC11Q96DB2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HDAC11Q96DB2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HDAC11Q96DB2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HDAC11Q96DB2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HDAC11Q96DB2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms