Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AL121672.3-201ENST00000608644 468 ntBASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 AC090164.3-201ENST00000610780 2143 ntBASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3KBP1Q96B97 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 AL499627.1-201ENST00000569373 2188 ntBASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 KRT18P56-201ENST00000507275 550 ntBASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH3KBP1Q96B97 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.96■□□□□ 0.46
SH3KBP1Q96B97 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SH3KBP1Q96B97 AL162741.1-201ENST00000565563 1558 ntBASIC17.96■□□□□ 0.46
SH3KBP1Q96B97 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 ATP5G2P1-201ENST00000433580 426 ntBASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 KRT18P41-201ENST00000518924 1277 ntBASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3KBP1Q96B97 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 HCG4P8-203ENST00000443049 980 ntBASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SH3KBP1Q96B97 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms