Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP13Q92995 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
USP13Q92995 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.97■□□□□ 0.63
USP13Q92995 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
USP13Q92995 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.97■□□□□ 0.63
USP13Q92995 AC009078.2-202ENST00000463353 338 ntBASIC18.97■□□□□ 0.63
USP13Q92995 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP13Q92995 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.97■□□□□ 0.63
USP13Q92995 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.97■□□□□ 0.63
USP13Q92995 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.97■□□□□ 0.63
USP13Q92995 LETM1P2-201ENST00000597330 2178 ntBASIC18.97■□□□□ 0.63
USP13Q92995 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
USP13Q92995 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP13Q92995 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.97■□□□□ 0.63
USP13Q92995 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.97■□□□□ 0.63
USP13Q92995 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP13Q92995 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP13Q92995 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.97■□□□□ 0.63
USP13Q92995 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP13Q92995 AC005082.1-201ENST00000413042 2259 ntBASIC18.97■□□□□ 0.63
USP13Q92995 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP13Q92995 AC009102.3-201ENST00000623118 1491 ntBASIC18.97■□□□□ 0.63
USP13Q92995 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.96■□□□□ 0.63
USP13Q92995 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.96■□□□□ 0.63
USP13Q92995 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
USP13Q92995 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
USP13Q92995 VENTXP7-201ENST00000475503 772 ntBASIC18.96■□□□□ 0.63
USP13Q92995 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.96■□□□□ 0.63
USP13Q92995 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.96■□□□□ 0.63
USP13Q92995 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.96■□□□□ 0.63
USP13Q92995 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.96■□□□□ 0.63
USP13Q92995 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.96■□□□□ 0.63
USP13Q92995 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.96■□□□□ 0.63
USP13Q92995 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.96■□□□□ 0.63
USP13Q92995 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.96■□□□□ 0.63
USP13Q92995 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP13Q92995 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP13Q92995 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.95■□□□□ 0.62
USP13Q92995 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.95■□□□□ 0.62
USP13Q92995 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USP13Q92995 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP13Q92995 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.95■□□□□ 0.62
USP13Q92995 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP13Q92995 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP13Q92995 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.95■□□□□ 0.62
USP13Q92995 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP13Q92995 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP13Q92995 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.95■□□□□ 0.62
USP13Q92995 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.95■□□□□ 0.62
USP13Q92995 AC011840.4-201ENST00000578471 627 ntBASIC18.95■□□□□ 0.62
USP13Q92995 AL353801.3-201ENST00000609898 542 ntBASIC18.95■□□□□ 0.62
USP13Q92995 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.95■□□□□ 0.62
USP13Q92995 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP13Q92995 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP13Q92995 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.95■□□□□ 0.62
USP13Q92995 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP13Q92995 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
USP13Q92995 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
USP13Q92995 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP13Q92995 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.95■□□□□ 0.62
USP13Q92995 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
USP13Q92995 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP13Q92995 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP13Q92995 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USP13Q92995 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP13Q92995 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP13Q92995 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
USP13Q92995 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP13Q92995 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP13Q92995 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP13Q92995 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP13Q92995 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP13Q92995 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms