Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 AL391807.1-203ENST00000604392 2365 ntBASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 AC055733.4-201ENST00000638462 1354 ntBASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM20Q8N5G0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMIM20Q8N5G0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 FP475955.4-201ENST00000623131 1990 ntBASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 AC093010.1-201ENST00000473625 1624 ntBASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 REST-206ENST00000612429 1376 ntTSL 5 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 REST-207ENST00000616975 1370 ntTSL 5 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 ANKRD18DP-204ENST00000455355 1975 ntBASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.27□□□□□ -0.61
SMIM20Q8N5G0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMIM20Q8N5G0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
SMIM20Q8N5G0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMIM20Q8N5G0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMIM20Q8N5G0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMIM20Q8N5G0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMIM20Q8N5G0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMIM20Q8N5G0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms