Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPOQ8N3V7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 MIR940-201ENST00000401276 94 ntBASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 AL591424.1-201ENST00000442569 1213 ntBASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 ABCD1P5-201ENST00000445663 754 ntBASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 AC027601.4-201ENST00000611259 610 ntBASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 AC125634.1-201ENST00000438758 1403 ntBASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SYNPOQ8N3V7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 IGHV3-22-201ENST00000520721 359 ntBASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 FAM197Y3-203ENST00000618346 717 ntBASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 AC083906.6-201ENST00000641366 219 ntBASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms