Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 AC009102.3-201ENST00000623118 1491 ntBASIC19.57■□□□□ 0.72
HERC6Q8IVU3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 RNA5SP416-201ENST00000516838 111 ntBASIC19.57■□□□□ 0.72
HERC6Q8IVU3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 AL139288.1-201ENST00000623748 933 ntBASIC19.57■□□□□ 0.72
HERC6Q8IVU3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HERC6Q8IVU3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 UNC93B6-202ENST00000528242 690 ntBASIC19.56■□□□□ 0.72
HERC6Q8IVU3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 AC105339.3-201ENST00000560043 636 ntBASIC19.56■□□□□ 0.72
HERC6Q8IVU3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HERC6Q8IVU3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 AC004832.2-201ENST00000426397 482 ntBASIC19.55■□□□□ 0.72
HERC6Q8IVU3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.55■□□□□ 0.72
HERC6Q8IVU3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 AP002414.3-201ENST00000589352 1468 ntBASIC19.54■□□□□ 0.72
HERC6Q8IVU3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.54■□□□□ 0.72
HERC6Q8IVU3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 AC018445.3-201ENST00000624177 1945 ntBASIC19.53■□□□□ 0.72
HERC6Q8IVU3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 AC007967.2-201ENST00000432613 625 ntBASIC19.53■□□□□ 0.72
HERC6Q8IVU3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms