Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 ESPNP-201ENST00000270691 2015 ntBASIC20.17■□□□□ 0.82
TRIM50Q86XT4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 TP73-AS1-210ENST00000637775 1455 ntBASIC20.17■□□□□ 0.82
TRIM50Q86XT4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 AP000974.1-201ENST00000623909 2387 ntBASIC20.16■□□□□ 0.82
TRIM50Q86XT4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM50Q86XT4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 AC132938.6-201ENST00000623828 1655 ntBASIC20.15■□□□□ 0.82
TRIM50Q86XT4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM50Q86XT4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
TRIM50Q86XT4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
TRIM50Q86XT4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRIM50Q86XT4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRIM50Q86XT4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 AC132008.2-207ENST00000454517 770 ntBASIC20.14■□□□□ 0.81
TRIM50Q86XT4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 AL138831.2-201ENST00000606564 490 ntBASIC20.14■□□□□ 0.81
TRIM50Q86XT4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRIM50Q86XT4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 GMCL1P1-201ENST00000463439 1581 ntBASIC20.13■□□□□ 0.81
TRIM50Q86XT4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms