Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC28Q86X40 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC28Q86X40 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC28Q86X40 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC28Q86X40 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 MIR1238-201ENST00000408483 83 ntBASIC16.15■□□□□ 0.18
LRRC28Q86X40 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 AP000692.2-201ENST00000608391 879 ntBASIC16.15■□□□□ 0.18
LRRC28Q86X40 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.15■□□□□ 0.18
LRRC28Q86X40 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC28Q86X40 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC28Q86X40 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC28Q86X40 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC28Q86X40 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC28Q86X40 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 LINC01023-201ENST00000606054 436 ntBASIC16.14■□□□□ 0.17
LRRC28Q86X40 AC068587.9-201ENST00000641814 219 ntBASIC16.14■□□□□ 0.17
LRRC28Q86X40 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC28Q86X40 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC28Q86X40 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 KRT8P45-201ENST00000414328 1447 ntBASIC16.13■□□□□ 0.17
LRRC28Q86X40 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms