Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 AC009102.3-201ENST00000623118 1491 ntBASIC18.23■□□□□ 0.51
RAPH1Q70E73 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 SLC25A6P5-201ENST00000435663 894 ntBASIC18.23■□□□□ 0.51
RAPH1Q70E73 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 MIR4674-201ENST00000582457 87 ntBASIC18.23■□□□□ 0.51
RAPH1Q70E73 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.23■□□□□ 0.51
RAPH1Q70E73 AL163051.1-201ENST00000569214 1512 ntBASIC18.23■□□□□ 0.51
RAPH1Q70E73 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAPH1Q70E73 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.23■□□□□ 0.51
RAPH1Q70E73 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RAPH1Q70E73 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAPH1Q70E73 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAPH1Q70E73 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RAPH1Q70E73 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAPH1Q70E73 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RAPH1Q70E73 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.22■□□□□ 0.51
RAPH1Q70E73 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.22■□□□□ 0.51
RAPH1Q70E73 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAPH1Q70E73 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAPH1Q70E73 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
RAPH1Q70E73 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAPH1Q70E73 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.22■□□□□ 0.51
RAPH1Q70E73 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAPH1Q70E73 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAPH1Q70E73 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 MIR149-201ENST00000384879 89 ntBASIC18.21■□□□□ 0.51
RAPH1Q70E73 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 KRT18P23-201ENST00000435622 1283 ntBASIC18.21■□□□□ 0.51
RAPH1Q70E73 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 SDHAP2-201ENST00000455183 2001 ntBASIC18.21■□□□□ 0.51
RAPH1Q70E73 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 CROCCP1-201ENST00000426910 5675 ntBASIC18.21■□□□□ 0.51
RAPH1Q70E73 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.21■□□□□ 0.51
RAPH1Q70E73 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAPH1Q70E73 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms