Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
DCLRE1AQ6PJP8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DCLRE1AQ6PJP8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
DCLRE1AQ6PJP8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DCLRE1AQ6PJP8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DCLRE1AQ6PJP8 AC125634.1-201ENST00000438758 1403 ntBASIC19.32■□□□□ 0.68
DCLRE1AQ6PJP8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DCLRE1AQ6PJP8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DCLRE1AQ6PJP8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DCLRE1AQ6PJP8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DCLRE1AQ6PJP8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 AC004408.2-201ENST00000623613 2777 ntBASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 AF238378.1-201ENST00000526806 358 ntBASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DCLRE1AQ6PJP8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 AC132008.2-207ENST00000454517 770 ntBASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 AC079776.4-201ENST00000511039 504 ntBASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 AP002469.2-201ENST00000531724 424 ntBASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.3■□□□□ 0.68
DCLRE1AQ6PJP8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 AL138781.2-201ENST00000617896 1843 ntBASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
DCLRE1AQ6PJP8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 AC106795.1-205ENST00000512851 1056 ntBASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms