Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 Z83836.1-201ENST00000624605 1642 ntBASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 AC004263.2-201ENST00000617183 678 ntBASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3AQ6IN85 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 AC132938.6-201ENST00000623828 1655 ntBASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3AQ6IN85 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 AL358472.4-201ENST00000633140 710 ntBASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 AP000550.4-202ENST00000639755 178 ntBASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 AL353692.3-201ENST00000407031 1396 ntBASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4R3AQ6IN85 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 LINC00602-201ENST00000629776 2065 ntBASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 AC020763.4-201ENST00000623414 4170 ntBASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 IER3-202ENST00000376377 1350 ntBASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3AQ6IN85 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms