Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC58Q4VC31 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC58Q4VC31 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC58Q4VC31 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC58Q4VC31 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 AC004951.3-201ENST00000418645 1148 ntBASIC16.24■□□□□ 0.19
CCDC58Q4VC31 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.24■□□□□ 0.19
CCDC58Q4VC31 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 CKBP1-201ENST00000565489 1086 ntBASIC16.24■□□□□ 0.19
CCDC58Q4VC31 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 AL109923.1-201ENST00000618799 583 ntBASIC16.24■□□□□ 0.19
CCDC58Q4VC31 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.24■□□□□ 0.19
CCDC58Q4VC31 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 LINC00554-201ENST00000564841 3011 ntBASIC16.24■□□□□ 0.19
CCDC58Q4VC31 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC58Q4VC31 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 AC012317.2-201ENST00000623305 2251 ntBASIC16.23■□□□□ 0.19
CCDC58Q4VC31 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 AC239809.2-201ENST00000415381 517 ntBASIC16.23■□□□□ 0.19
CCDC58Q4VC31 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 AL353708.3-201ENST00000610272 989 ntBASIC16.23■□□□□ 0.19
CCDC58Q4VC31 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC58Q4VC31 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC58Q4VC31 AP003097.1-201ENST00000530657 1135 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms