Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LONRF3Q496Y0 KRT8P7-201ENST00000533003 1432 ntBASIC20.61■□□□□ 0.89
LONRF3Q496Y0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 GCSHP2-201ENST00000560971 527 ntBASIC20.61■□□□□ 0.89
LONRF3Q496Y0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 AL031432.5-201ENST00000641059 760 ntBASIC20.61■□□□□ 0.89
LONRF3Q496Y0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.61■□□□□ 0.89
LONRF3Q496Y0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 LINC00896-202ENST00000609602 2128 ntBASIC20.6■□□□□ 0.89
LONRF3Q496Y0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
LONRF3Q496Y0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 AL671277.2-201ENST00000458060 996 ntBASIC20.59■□□□□ 0.89
LONRF3Q496Y0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LONRF3Q496Y0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms