Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 AC116562.4-201ENST00000641316 2276 ntBASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 FAM220CP-201ENST00000395253 831 ntBASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 Z83851.2-201ENST00000609564 659 ntBASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TRIM71Q2Q1W2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 AP002414.3-201ENST00000589352 1468 ntBASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 AC005104.2-201ENST00000427818 678 ntBASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM71Q2Q1W2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 ANO7L1-203ENST00000602586 1720 ntBASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 MED15P5-201ENST00000423150 992 ntBASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 AC105339.3-201ENST00000560043 636 ntBASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 AC055717.3-201ENST00000622967 595 ntBASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM71Q2Q1W2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 AL591424.1-201ENST00000442569 1213 ntBASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
TRIM71Q2Q1W2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms