Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 KRT18P65-201ENST00000439811 1286 ntBASIC21.87■■□□□ 1.09
RFX7Q2KHR2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 Z69720.1-201ENST00000601483 472 ntBASIC21.87■■□□□ 1.09
RFX7Q2KHR2 AC004263.2-201ENST00000617183 678 ntBASIC21.87■■□□□ 1.09
RFX7Q2KHR2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.87■■□□□ 1.09
RFX7Q2KHR2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 IGHV3-41-201ENST00000613121 348 ntBASIC21.86■■□□□ 1.09
RFX7Q2KHR2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.86■■□□□ 1.09
RFX7Q2KHR2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 NSUN5P1-202ENST00000421140 1535 ntBASIC21.85■■□□□ 1.09
RFX7Q2KHR2 NSUN5P2-203ENST00000457352 1529 ntBASIC21.85■■□□□ 1.09
RFX7Q2KHR2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 AC091304.2-201ENST00000564639 760 ntBASIC21.85■■□□□ 1.09
RFX7Q2KHR2 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 AC099336.1-202ENST00000602961 463 ntBASIC21.85■■□□□ 1.09
RFX7Q2KHR2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.85■■□□□ 1.09
RFX7Q2KHR2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.84■■□□□ 1.09
RFX7Q2KHR2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 AC106795.1-205ENST00000512851 1056 ntBASIC21.84■■□□□ 1.09
RFX7Q2KHR2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 SLC25A6P4-201ENST00000586535 553 ntBASIC21.84■■□□□ 1.09
RFX7Q2KHR2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.84■■□□□ 1.09
RFX7Q2KHR2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX7Q2KHR2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms