Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PDS5AQ29RF7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PDS5AQ29RF7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PDS5AQ29RF7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PDS5AQ29RF7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.65■■□□□ 1.06
PDS5AQ29RF7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PDS5AQ29RF7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PDS5AQ29RF7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDS5AQ29RF7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDS5AQ29RF7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDS5AQ29RF7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PDS5AQ29RF7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDS5AQ29RF7 AL096828.2-201ENST00000567259 1965 ntBASIC21.64■■□□□ 1.06
PDS5AQ29RF7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDS5AQ29RF7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.64■■□□□ 1.06
PDS5AQ29RF7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.64■■□□□ 1.06
PDS5AQ29RF7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDS5AQ29RF7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDS5AQ29RF7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDS5AQ29RF7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.63■■□□□ 1.05
PDS5AQ29RF7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 AL773604.1-201ENST00000617417 272 ntBASIC21.63■■□□□ 1.05
PDS5AQ29RF7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.63■■□□□ 1.05
PDS5AQ29RF7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDS5AQ29RF7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 FAM197Y8-203ENST00000450145 560 ntBASIC21.62■■□□□ 1.05
PDS5AQ29RF7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 AC010460.3-201ENST00000511359 1579 ntBASIC21.62■■□□□ 1.05
PDS5AQ29RF7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDS5AQ29RF7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 AL020996.1-203ENST00000536896 2307 ntBASIC21.61■■□□□ 1.05
PDS5AQ29RF7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 AP000867.4-201ENST00000641616 219 ntBASIC21.61■■□□□ 1.05
PDS5AQ29RF7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms