Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
H3F3AP84243 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
H3F3AP84243 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.2■□□□□ 0.18
H3F3AP84243 AC005332.1-201ENST00000577698 1310 ntBASIC16.2■□□□□ 0.18
H3F3AP84243 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
H3F3AP84243 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
H3F3AP84243 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.2■□□□□ 0.18
H3F3AP84243 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
H3F3AP84243 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 DUTP2-201ENST00000519164 463 ntBASIC16.2■□□□□ 0.18
H3F3AP84243 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.2■□□□□ 0.18
H3F3AP84243 RNF126P1-202ENST00000569893 925 ntBASIC16.2■□□□□ 0.18
H3F3AP84243 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.2■□□□□ 0.18
H3F3AP84243 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
H3F3AP84243 AC005332.3-201ENST00000589904 676 ntBASIC16.2■□□□□ 0.18
H3F3AP84243 GPR32P1-201ENST00000601788 811 ntBASIC16.2■□□□□ 0.18
H3F3AP84243 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.2■□□□□ 0.18
H3F3AP84243 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3AP84243 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
H3F3AP84243 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
H3F3AP84243 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 LINC00602-201ENST00000629776 2065 ntBASIC16.19■□□□□ 0.18
H3F3AP84243 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
H3F3AP84243 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3AP84243 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3AP84243 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3AP84243 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3AP84243 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.19■□□□□ 0.18
H3F3AP84243 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3AP84243 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
H3F3AP84243 AL390719.2-201ENST00000606993 987 ntBASIC16.19■□□□□ 0.18
H3F3AP84243 AC004263.2-201ENST00000617183 678 ntBASIC16.19■□□□□ 0.18
H3F3AP84243 AC116407.4-201ENST00000623319 1061 ntBASIC16.19■□□□□ 0.18
H3F3AP84243 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3AP84243 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.19■□□□□ 0.18
H3F3AP84243 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3AP84243 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
H3F3AP84243 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
H3F3AP84243 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
H3F3AP84243 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
H3F3AP84243 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.18■□□□□ 0.18
H3F3AP84243 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.18■□□□□ 0.18
H3F3AP84243 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 AL353692.3-201ENST00000407031 1396 ntBASIC16.18■□□□□ 0.18
H3F3AP84243 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.18■□□□□ 0.18
H3F3AP84243 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.18■□□□□ 0.18
H3F3AP84243 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
H3F3AP84243 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.18■□□□□ 0.18
H3F3AP84243 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.18■□□□□ 0.18
H3F3AP84243 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.18■□□□□ 0.18
H3F3AP84243 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.18■□□□□ 0.18
H3F3AP84243 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.18■□□□□ 0.18
H3F3AP84243 AC011498.5-201ENST00000592027 486 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms