Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.435e-6■■□□□ 11.5
NCBP2P52298 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC12.37□□□□□ -0.435e-6■■□□□ 11.5
NCBP2P52298 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC12.37□□□□□ -0.435e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC12.35□□□□□ -0.435e-6■■□□□ 11.5
NCBP2P52298 GABBR1-206ENST00000462632 609 ntTSL 412.29□□□□□ -0.445e-6■■□□□ 11.5
NCBP2P52298 NFE2L1-213ENST00000581441 552 ntTSL 412.21□□□□□ -0.455e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.465e-6■■□□□ 11.5
NCBP2P52298 VPS28-216ENST00000533806 650 ntTSL 311.95□□□□□ -0.55e-6■■□□□ 11.5
NCBP2P52298 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC11.5□□□□□ -0.575e-6■■□□□ 11.5
NCBP2P52298 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.575e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-214ENST00000590448 604 ntTSL 211.46□□□□□ -0.575e-6■■□□□ 11.5
NCBP2P52298 TLN1-202ENST00000378192 1693 ntTSL 211.04□□□□□ -0.645e-6■■□□□ 11.5
NCBP2P52298 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.75e-6■■□□□ 11.5
NCBP2P52298 VPS28-214ENST00000531032 573 ntTSL 1 (best)10.24□□□□□ -0.775e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-218ENST00000592364 576 ntTSL 59.98□□□□□ -0.815e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-219ENST00000592989 553 ntTSL 59.76□□□□□ -0.855e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.855e-6■■□□□ 11.5
NCBP2P52298 VPS28-204ENST00000526054 892 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.915e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-212ENST00000590324 807 ntTSL 58.92□□□□□ -0.985e-6■■□□□ 11.5
NCBP2P52298 SPAG5-207ENST00000580083 978 ntTSL 38.66□□□□□ -1.025e-6■■□□□ 11.5
NCBP2P52298 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.055e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-203ENST00000585650 520 ntTSL 55.59□□□□□ -1.515e-6■■□□□ 11.5
NCBP2P52298 SPAG5-202ENST00000378976 755 ntTSL 55.43□□□□□ -1.545e-6■■□□□ 11.5
NCBP2P52298 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.95□□□□□ -1.785e-6■■□□□ 11.5
NCBP2P52298 ZNF202-204ENST00000528306 552 ntTSL 420.01■□□□□ 0.791e-6■■□□□ 11.5
NCBP2P52298 ZNF202-209ENST00000533463 855 ntTSL 316.94■□□□□ 0.31e-6■■□□□ 11.5
NCBP2P52298 ZNF202-202ENST00000525391 640 ntTSL 215.59■□□□□ 0.091e-6■■□□□ 11.5
NCBP2P52298 ZNF202-208ENST00000530944 585 ntTSL 514.64□□□□□ -0.071e-6■■□□□ 11.5
NCBP2P52298 ZNF202-205ENST00000529250 541 ntTSL 214.64□□□□□ -0.071e-6■■□□□ 11.5
NCBP2P52298 ZNF202-203ENST00000526252 564 ntTSL 413.61□□□□□ -0.231e-6■■□□□ 11.5
NCBP2P52298 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.321e-6■■□□□ 11.5
NCBP2P52298 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.371e-6■■□□□ 11.5
NCBP2P52298 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.531e-6■■□□□ 11.5
NCBP2P52298 ASNA1-203ENST00000590633 592 ntTSL 217.91■□□□□ 0.467e-8■■□□□ 11.5
NCBP2P52298 ASNA1-202ENST00000586561 848 ntTSL 215.6■□□□□ 0.097e-8■■□□□ 11.5
NCBP2P52298 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.167e-8■■□□□ 11.5
NCBP2P52298 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.53□□□□□ -0.247e-8■■□□□ 11.5
NCBP2P52298 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.567e-8■■□□□ 11.5
NCBP2P52298 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.5■■□□□ 1.198e-30■■□□□ 11.5
NCBP2P52298 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.138e-30■■□□□ 11.5
NCBP2P52298 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.36□□□□□ -1.238e-30■■□□□ 11.5
NCBP2P52298 PICALM-223ENST00000534412 811 ntTSL 55.25□□□□□ -1.578e-30■■□□□ 11.5
NCBP2P52298 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.04■□□□□ 0.642e-10■■□□□ 11.5
NCBP2P52298 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.442e-10■■□□□ 11.5
NCBP2P52298 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.242e-10■■□□□ 11.5
NCBP2P52298 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.322e-10■■□□□ 11.5
NCBP2P52298 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.96■□□□□ 0.152e-23■■□□□ 11.5
NCBP2P52298 ADAM10-216ENST00000561149 529 ntTSL 415.75■□□□□ 0.112e-23■■□□□ 11.5
NCBP2P52298 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.68■□□□□ 0.12e-23■■□□□ 11.5
NCBP2P52298 ADAM10-212ENST00000558004 587 ntTSL 515.6■□□□□ 0.092e-23■■□□□ 11.5
NCBP2P52298 ADAM10-213ENST00000558733 995 ntTSL 313.44□□□□□ -0.262e-23■■□□□ 11.5
NCBP2P52298 ADAM10-215ENST00000560608 587 ntTSL 412.9□□□□□ -0.342e-23■■□□□ 11.5
NCBP2P52298 ADAM10-204ENST00000439637 601 ntTSL 312.74□□□□□ -0.372e-23■■□□□ 11.5
NCBP2P52298 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.852e-23■■□□□ 11.5
NCBP2P52298 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.81■□□□□ 0.443e-20■■□□□ 11.5
NCBP2P52298 AL096870.2-202ENST00000528804 2102 ntTSL 217.62■□□□□ 0.413e-20■■□□□ 11.5
NCBP2P52298 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.35■□□□□ 0.213e-20■■□□□ 11.5
NCBP2P52298 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.073e-20■■□□□ 11.5
NCBP2P52298 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.29□□□□□ -0.123e-20■■□□□ 11.5
NCBP2P52298 CHMP4A-203ENST00000527154 571 ntTSL 214.22□□□□□ -0.133e-20■■□□□ 11.5
NCBP2P52298 CHMP4A-207ENST00000533523 1266 ntTSL 1 (best)14.21□□□□□ -0.133e-20■■□□□ 11.5
NCBP2P52298 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.753e-20■■□□□ 11.5
NCBP2P52298 CHMP4A-208ENST00000534106 370 ntTSL 52.48□□□□□ -2.013e-20■■□□□ 11.5
NCBP2P52298 SRPK1-210ENST00000508473 858 ntTSL 222.19■■□□□ 1.142e-10■■□□□ 11.4
NCBP2P52298 SRPK1-201ENST00000346162 4762 ntTSL 214.82□□□□□ -0.042e-10■■□□□ 11.4
NCBP2P52298 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.082e-10■■□□□ 11.4
NCBP2P52298 SRPK1-202ENST00000361690 4286 ntTSL 1 (best)9.54□□□□□ -0.882e-10■■□□□ 11.4
NCBP2P52298 SRPK1-209ENST00000507909 581 ntTSL 49.15□□□□□ -0.942e-10■■□□□ 11.4
NCBP2P52298 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC9.07□□□□□ -0.962e-10■■□□□ 11.4
NCBP2P52298 SRPK1-212ENST00000512445 559 ntTSL 56.07□□□□□ -1.442e-10■■□□□ 11.4
NCBP2P52298 SRPK1-213ENST00000513367 634 ntTSL 25.09□□□□□ -1.592e-10■■□□□ 11.4
NCBP2P52298 SRPK1-211ENST00000510290 621 ntTSL 33.49□□□□□ -1.852e-10■■□□□ 11.4
NCBP2P52298 MAPK6-203ENST00000558100 514 ntTSL 212.01□□□□□ -0.491e-8■■□□□ 11.4
NCBP2P52298 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.241e-8■■□□□ 11.4
NCBP2P52298 MAPK6-208ENST00000560802 552 ntTSL 46.13□□□□□ -1.431e-8■■□□□ 11.4
NCBP2P52298 MAPK6-202ENST00000558063 583 ntTSL 42.26□□□□□ -2.051e-8■■□□□ 11.4
NCBP2P52298 MAPK6-206ENST00000560254 574 ntTSL 42.22□□□□□ -2.051e-8■■□□□ 11.4
NCBP2P52298 GINS1-204ENST00000484893 583 ntTSL 512.08□□□□□ -0.489e-13■■□□□ 11.4
NCBP2P52298 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.099e-13■■□□□ 11.4
NCBP2P52298 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.52■□□□□ 0.729e-8■■□□□ 11.4
NCBP2P52298 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.659e-8■■□□□ 11.4
NCBP2P52298 GPAA1-211ENST00000529503 878 ntTSL 519.03■□□□□ 0.649e-8■■□□□ 11.4
NCBP2P52298 GPAA1-207ENST00000526341 557 ntTSL 519.03■□□□□ 0.649e-8■■□□□ 11.4
NCBP2P52298 GPAA1-217ENST00000532758 1079 ntTSL 317.76■□□□□ 0.439e-8■■□□□ 11.4
NCBP2P52298 GPAA1-204ENST00000525087 937 ntTSL 517.76■□□□□ 0.439e-8■■□□□ 11.4
NCBP2P52298 GPAA1-214ENST00000530633 835 ntTSL 317.66■□□□□ 0.429e-8■■□□□ 11.4
NCBP2P52298 BMP4-203ENST00000558489 605 ntTSL 314.06□□□□□ -0.165e-7■■□□□ 11.4
NCBP2P52298 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.523e-6■■□□□ 11.4
NCBP2P52298 ACAA2-203ENST00000586100 639 ntTSL 411.29□□□□□ -0.63e-6■■□□□ 11.4
NCBP2P52298 ACAA2-201ENST00000285093 3350 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.763e-6■■□□□ 11.4
NCBP2P52298 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.543e-6■■□□□ 11.4
NCBP2P52298 ACAA2-204ENST00000586485 727 ntTSL 24.86□□□□□ -1.633e-6■■□□□ 11.4
NCBP2P52298 AKAP13-220ENST00000560571 712 ntTSL 317.39■□□□□ 0.371e-7■■□□□ 11.4
NCBP2P52298 AKAP13-211ENST00000559362 5459 ntTSL 216.47■□□□□ 0.231e-7■■□□□ 11.4
NCBP2P52298 MIR7706-201ENST00000613747 67 ntBASIC15.8■□□□□ 0.121e-7■■□□□ 11.4
NCBP2P52298 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC8.87□□□□□ -0.991e-7■■□□□ 11.4
NCBP2P52298 DSN1-206ENST00000447406 1146 ntTSL 516.92■□□□□ 0.35e-7■■□□□ 11.4
NCBP2P52298 DSN1-210ENST00000492703 726 ntTSL 516.08■□□□□ 0.165e-7■■□□□ 11.4
NCBP2P52298 DSN1-205ENST00000438549 631 ntTSL 514.6□□□□□ -0.075e-7■■□□□ 11.4
NCBP2P52298 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.35e-7■■□□□ 11.4
Retrieved 100 of 18,329 protein–RNA pairs in 213.4 ms