RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 AEBP2Q6ZN18 517 aaPredicted RBP29.2■■■□□ 2.26
SRPK1-213ENST00000513367 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
SRPK1-213ENST00000513367 SENP3Q9H4L4 574 aaPredicted RBP24.86■■□□□ 1.57
SRPK1-213ENST00000513367 PHF23Q9BUL5 403 aaPredicted RBP24.53■■□□□ 1.52
SRPK1-213ENST00000513367 FOXD1Q16676 465 aa23.34■■□□□ 1.33
SRPK1-213ENST00000513367 POTEDQ86YR6 584 aa22.57■■□□□ 1.2
SRPK1-213ENST00000513367 MSH5O43196 834 aa21.95■■□□□ 1.1
SRPK1-213ENST00000513367 PIAS4Q8N2W9 510 aaPredicted RBP21.62■■□□□ 1.05
SRPK1-213ENST00000513367 PPP6R1Q9UPN7 881 aa21.42■■□□□ 1.02
SRPK1-213ENST00000513367 ADRA2BP18089 450 aa21.29■■□□□ 1
SRPK1-213ENST00000513367 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
SRPK1-213ENST00000513367 MAPK8IP2Q13387 824 aaPredicted RBP19.77■□□□□ 0.76
SRPK1-213ENST00000513367 DMRT2Q9Y5R5 561 aa19.65■□□□□ 0.74
SRPK1-213ENST00000513367 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
SRPK1-213ENST00000513367 CACNB1Q02641 598 aaPredicted RBP19.27■□□□□ 0.68
SRPK1-213ENST00000513367 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
SRPK1-213ENST00000513367 RNF39Q9H2S5 420 aa18.74■□□□□ 0.59
SRPK1-213ENST00000513367 HOXD11P31277 338 aaPredicted RBP18.68■□□□□ 0.58
SRPK1-213ENST00000513367 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
SRPK1-213ENST00000513367 C1QBPQ07021 282 aaKnown RBP18.38■□□□□ 0.53
SRPK1-213ENST00000513367 CNKSR2Q8WXI2 1034 aa18.37■□□□□ 0.53
SRPK1-213ENST00000513367 RNF216Q9NWF9 866 aaPredicted RBP18.36■□□□□ 0.53
SRPK1-213ENST00000513367 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
SRPK1-213ENST00000513367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.8■□□□□ 0.444e-9■■■□□ 15
SRPK1-213ENST00000513367 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
SRPK1-213ENST00000513367 POTEHQ6S545 545 aa17.54■□□□□ 0.4
SRPK1-213ENST00000513367 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
SRPK1-213ENST00000513367 U3KPZ7 1027 aaPredicted RBP17.41■□□□□ 0.38
SRPK1-213ENST00000513367 SPINK5Q9NQ38 1064 aaPredicted RBP17.38■□□□□ 0.37
SRPK1-213ENST00000513367 DSG3P32926 999 aa17.37■□□□□ 0.37
SRPK1-213ENST00000513367 CAPN15O75808 1086 aa17.31■□□□□ 0.36
SRPK1-213ENST00000513367 TRHP20396 242 aaPredicted RBP16.91■□□□□ 0.3
SRPK1-213ENST00000513367 ABCB7O75027 752 aa16.9■□□□□ 0.3
SRPK1-213ENST00000513367 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
SRPK1-213ENST00000513367 ZNF219Q9P2Y4 722 aaPredicted RBP16.76■□□□□ 0.27
SRPK1-213ENST00000513367 APLP2Q06481 763 aa16.67■□□□□ 0.26
SRPK1-213ENST00000513367 KCNA4P22459 653 aa16.66■□□□□ 0.26
SRPK1-213ENST00000513367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
SRPK1-213ENST00000513367 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
SRPK1-213ENST00000513367 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
SRPK1-213ENST00000513367 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
SRPK1-213ENST00000513367 CHRDL2Q6WN34 429 aa16.44■□□□□ 0.22
SRPK1-213ENST00000513367 POLA2Q14181 598 aa16.3■□□□□ 0.2
SRPK1-213ENST00000513367 SP7Q8TDD2 431 aaPredicted RBP16.14■□□□□ 0.17
SRPK1-213ENST00000513367 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
SRPK1-213ENST00000513367 NISCHQ9Y2I1 1504 aa16.07■□□□□ 0.16
SRPK1-213ENST00000513367 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
SRPK1-213ENST00000513367 PIP4P2Q8N4L2 257 aa15.94■□□□□ 0.14
SRPK1-213ENST00000513367 ATF5Q9Y2D1 282 aaPredicted RBP15.94■□□□□ 0.14
SRPK1-213ENST00000513367 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
SRPK1-213ENST00000513367 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
SRPK1-213ENST00000513367 HAX1O00165 279 aa15.8■□□□□ 0.12
SRPK1-213ENST00000513367 ZBTB12Q9Y330 459 aaPredicted RBP15.79■□□□□ 0.12
SRPK1-213ENST00000513367 PITPNM1O00562 1244 aa15.77■□□□□ 0.12
SRPK1-213ENST00000513367 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
SRPK1-213ENST00000513367 EVX2Q03828 476 aa15.67■□□□□ 0.1
SRPK1-213ENST00000513367 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
SRPK1-213ENST00000513367 SLC4A1APQ9BWU0 796 aaKnown RBP15.54■□□□□ 0.08
SRPK1-213ENST00000513367 ABCC9O60706 1549 aa15.43■□□□□ 0.06
SRPK1-213ENST00000513367 ZBTB22O15209 634 aa15.34■□□□□ 0.05
SRPK1-213ENST00000513367 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
SRPK1-213ENST00000513367 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
SRPK1-213ENST00000513367 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
SRPK1-213ENST00000513367 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
SRPK1-213ENST00000513367 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
SRPK1-213ENST00000513367 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
SRPK1-213ENST00000513367 GABBR2O75899 941 aa15.2■□□□□ 0.02
SRPK1-213ENST00000513367 FBLN2P98095 1184 aa15.2■□□□□ 0.02
SRPK1-213ENST00000513367 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
SRPK1-213ENST00000513367 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
SRPK1-213ENST00000513367 MKRN4PQ13434 485 aaPredicted RBP15.15■□□□□ 0.02
SRPK1-213ENST00000513367 LHX8Q68G74 356 aa15.14■□□□□ 0.01
SRPK1-213ENST00000513367 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
SRPK1-213ENST00000513367 SSUH2Q9Y2M2 353 aa15.09■□□□□ 0.01
SRPK1-213ENST00000513367 ZNF692Q9BU19 519 aaPredicted RBP15.07■□□□□ 0
SRPK1-213ENST00000513367 POTEIP0CG38 1075 aa14.93□□□□□ -0.02
SRPK1-213ENST00000513367 PRR29P0C7W0 189 aa14.89□□□□□ -0.03
SRPK1-213ENST00000513367 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
SRPK1-213ENST00000513367 CD44P16070 742 aaKnown RBP14.81□□□□□ -0.04
SRPK1-213ENST00000513367 FARP1Q9Y4F1 1045 aaPredicted RBP14.75□□□□□ -0.05
SRPK1-213ENST00000513367 PLSCR2Q9NRY7 297 aa14.7□□□□□ -0.06
SRPK1-213ENST00000513367 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
SRPK1-213ENST00000513367 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
SRPK1-213ENST00000513367 CLCN6P51797 869 aa14.57□□□□□ -0.08
SRPK1-213ENST00000513367 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
SRPK1-213ENST00000513367 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
SRPK1-213ENST00000513367 GALR2O43603 387 aaPredicted RBP14.47□□□□□ -0.09
SRPK1-213ENST00000513367 OTUD5Q96G74 571 aa14.46□□□□□ -0.09
SRPK1-213ENST00000513367 POTEB2H3BUK9 544 aa14.44□□□□□ -0.1
SRPK1-213ENST00000513367 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
SRPK1-213ENST00000513367 RB1CC1Q8TDY2 1594 aa14.33□□□□□ -0.12
SRPK1-213ENST00000513367 DNAJC5Q9H3Z4 198 aa14.32□□□□□ -0.12
SRPK1-213ENST00000513367 PHF12Q96QT6 1004 aa14.31□□□□□ -0.12
SRPK1-213ENST00000513367 POTEMA6NI47 508 aa14.3□□□□□ -0.12
SRPK1-213ENST00000513367 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
SRPK1-213ENST00000513367 POTEGQ6S5H5 508 aa14.24□□□□□ -0.13
SRPK1-213ENST00000513367 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
SRPK1-213ENST00000513367 PAK3O75914 559 aaPredicted RBP14.17□□□□□ -0.14
SRPK1-213ENST00000513367 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
SRPK1-213ENST00000513367 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms