Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 DNAJB3-201ENST00000446806 729 ntBASIC18.93■□□□□ 0.62
MTHFRP42898 KRT18P3-201ENST00000451602 1288 ntBASIC18.93■□□□□ 0.62
MTHFRP42898 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.93■□□□□ 0.62
MTHFRP42898 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.93■□□□□ 0.62
MTHFRP42898 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MTHFRP42898 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.93■□□□□ 0.62
MTHFRP42898 AC010327.4-202ENST00000591484 748 ntBASIC18.93■□□□□ 0.62
MTHFRP42898 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MTHFRP42898 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MTHFRP42898 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MTHFRP42898 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.93■□□□□ 0.62
MTHFRP42898 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MTHFRP42898 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MTHFRP42898 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MTHFRP42898 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MTHFRP42898 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MTHFRP42898 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MTHFRP42898 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.92■□□□□ 0.62
MTHFRP42898 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MTHFRP42898 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.92■□□□□ 0.62
MTHFRP42898 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.92■□□□□ 0.62
MTHFRP42898 TNXA-203ENST00000507684 2038 ntBASIC18.92■□□□□ 0.62
MTHFRP42898 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 RPSAP43-201ENST00000402237 625 ntBASIC18.92■□□□□ 0.62
MTHFRP42898 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.92■□□□□ 0.62
MTHFRP42898 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.92■□□□□ 0.62
MTHFRP42898 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.92■□□□□ 0.62
MTHFRP42898 AL139424.1-201ENST00000607572 797 ntBASIC18.92■□□□□ 0.62
MTHFRP42898 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MTHFRP42898 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MTHFRP42898 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MTHFRP42898 AC125634.1-201ENST00000438758 1403 ntBASIC18.91■□□□□ 0.62
MTHFRP42898 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MTHFRP42898 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
MTHFRP42898 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.91■□□□□ 0.62
MTHFRP42898 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MTHFRP42898 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MTHFRP42898 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.91■□□□□ 0.62
MTHFRP42898 PMS2P2-201ENST00000425039 1128 ntBASIC18.91■□□□□ 0.62
MTHFRP42898 GPX1P2-201ENST00000429271 606 ntBASIC18.91■□□□□ 0.62
MTHFRP42898 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MTHFRP42898 RNA5SP415-201ENST00000517246 115 ntBASIC18.91■□□□□ 0.62
MTHFRP42898 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.91■□□□□ 0.62
MTHFRP42898 AC040169.1-201ENST00000565382 521 ntBASIC18.91■□□□□ 0.62
MTHFRP42898 AP001160.2-201ENST00000596071 487 ntBASIC18.91■□□□□ 0.62
MTHFRP42898 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MTHFRP42898 AL139288.1-201ENST00000623748 933 ntBASIC18.91■□□□□ 0.62
MTHFRP42898 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.91■□□□□ 0.62
MTHFRP42898 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
MTHFRP42898 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MTHFRP42898 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.91■□□□□ 0.62
MTHFRP42898 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MTHFRP42898 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
MTHFRP42898 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MTHFRP42898 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MTHFRP42898 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MTHFRP42898 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
MTHFRP42898 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.9■□□□□ 0.62
MTHFRP42898 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.9■□□□□ 0.62
MTHFRP42898 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.9■□□□□ 0.62
MTHFRP42898 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.9■□□□□ 0.62
MTHFRP42898 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.9■□□□□ 0.62
MTHFRP42898 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.9■□□□□ 0.62
MTHFRP42898 AC008735.5-201ENST00000623544 497 ntBASIC18.9■□□□□ 0.62
MTHFRP42898 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.9■□□□□ 0.62
MTHFRP42898 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
MTHFRP42898 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.9■□□□□ 0.62
MTHFRP42898 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MTHFRP42898 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
MTHFRP42898 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MTHFRP42898 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms