Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT2P35908 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT2P35908 AC008764.6-201ENST00000595909 2069 ntBASIC20.79■□□□□ 0.92
KRT2P35908 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT2P35908 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT2P35908 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.79■□□□□ 0.92
KRT2P35908 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
KRT2P35908 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT2P35908 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
KRT2P35908 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
KRT2P35908 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
KRT2P35908 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
KRT2P35908 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.78■□□□□ 0.92
KRT2P35908 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT2P35908 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.78■□□□□ 0.92
KRT2P35908 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.78■□□□□ 0.92
KRT2P35908 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 MIR662-201ENST00000384847 95 ntBASIC20.78■□□□□ 0.92
KRT2P35908 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT2P35908 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.78■□□□□ 0.92
KRT2P35908 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.78■□□□□ 0.92
KRT2P35908 ZNF444P1-201ENST00000559497 298 ntBASIC20.78■□□□□ 0.92
KRT2P35908 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
KRT2P35908 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT2P35908 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT2P35908 AC083849.1-201ENST00000615227 514 ntBASIC20.78■□□□□ 0.92
KRT2P35908 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.78■□□□□ 0.92
KRT2P35908 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
KRT2P35908 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
KRT2P35908 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KRT2P35908 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT2P35908 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT2P35908 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KRT2P35908 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
KRT2P35908 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KRT2P35908 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.77■□□□□ 0.92
KRT2P35908 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT2P35908 AL671277.2-201ENST00000458060 996 ntBASIC20.77■□□□□ 0.92
KRT2P35908 DUTP2-201ENST00000519164 463 ntBASIC20.77■□□□□ 0.92
KRT2P35908 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.77■□□□□ 0.92
KRT2P35908 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.77■□□□□ 0.92
KRT2P35908 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT2P35908 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KRT2P35908 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 BCL2-203ENST00000589955 5011 ntBASIC20.77■□□□□ 0.92
KRT2P35908 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT2P35908 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT2P35908 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.77■□□□□ 0.91
KRT2P35908 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.77■□□□□ 0.91
KRT2P35908 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KRT2P35908 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT2P35908 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT2P35908 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
KRT2P35908 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
KRT2P35908 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT2P35908 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KRT2P35908 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.76■□□□□ 0.91
KRT2P35908 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT2P35908 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.76■□□□□ 0.91
KRT2P35908 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.76■□□□□ 0.91
KRT2P35908 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.76■□□□□ 0.91
KRT2P35908 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.76■□□□□ 0.91
KRT2P35908 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT2P35908 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT2P35908 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT2P35908 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms