Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 AL049637.2-201ENST00000641778 930 ntBASIC16.86■□□□□ 0.29
TNFRSF1BP20333 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF1BP20333 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 AL355355.2-201ENST00000442321 338 ntBASIC16.85■□□□□ 0.29
TNFRSF1BP20333 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 CR769767.2-201ENST00000622735 460 ntBASIC16.85■□□□□ 0.29
TNFRSF1BP20333 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF1BP20333 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 AC233702.5-201ENST00000584107 538 ntBASIC16.84■□□□□ 0.29
TNFRSF1BP20333 AC026471.5-201ENST00000615068 467 ntBASIC16.84■□□□□ 0.29
TNFRSF1BP20333 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 HOXB1-202ENST00000577092 1414 ntBASIC16.84■□□□□ 0.29
TNFRSF1BP20333 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF1BP20333 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFRSF1BP20333 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFRSF1BP20333 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 GCSHP5-201ENST00000443090 522 ntBASIC16.83■□□□□ 0.28
TNFRSF1BP20333 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms