Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMPD1P17405 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.1■□□□□ 0.81
SMPD1P17405 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SMPD1P17405 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.1■□□□□ 0.81
SMPD1P17405 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMPD1P17405 AC027601.4-201ENST00000611259 610 ntBASIC20.1■□□□□ 0.81
SMPD1P17405 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.1■□□□□ 0.81
SMPD1P17405 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMPD1P17405 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.1■□□□□ 0.81
SMPD1P17405 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMPD1P17405 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.09■□□□□ 0.81
SMPD1P17405 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.09■□□□□ 0.81
SMPD1P17405 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.09■□□□□ 0.81
SMPD1P17405 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMPD1P17405 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.09■□□□□ 0.81
SMPD1P17405 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.09■□□□□ 0.81
SMPD1P17405 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.09■□□□□ 0.81
SMPD1P17405 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.09■□□□□ 0.81
SMPD1P17405 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.09■□□□□ 0.81
SMPD1P17405 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.09■□□□□ 0.81
SMPD1P17405 AL356488.2-201ENST00000602755 427 ntBASIC20.09■□□□□ 0.81
SMPD1P17405 Z83851.2-201ENST00000609564 659 ntBASIC20.09■□□□□ 0.81
SMPD1P17405 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.09■□□□□ 0.81
SMPD1P17405 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMPD1P17405 AC107918.4-202ENST00000641623 219 ntBASIC20.09■□□□□ 0.81
SMPD1P17405 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.09■□□□□ 0.81
SMPD1P17405 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD1P17405 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD1P17405 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.08■□□□□ 0.81
SMPD1P17405 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.08■□□□□ 0.81
SMPD1P17405 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD1P17405 AC126763.1-201ENST00000552015 2118 ntBASIC20.08■□□□□ 0.81
SMPD1P17405 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD1P17405 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.08■□□□□ 0.81
SMPD1P17405 AP002414.3-201ENST00000589352 1468 ntBASIC20.08■□□□□ 0.81
SMPD1P17405 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD1P17405 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD1P17405 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD1P17405 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.08■□□□□ 0.81
SMPD1P17405 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.08■□□□□ 0.81
SMPD1P17405 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD1P17405 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.08■□□□□ 0.81
SMPD1P17405 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.08■□□□□ 0.81
SMPD1P17405 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SMPD1P17405 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.08■□□□□ 0.8
SMPD1P17405 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMPD1P17405 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
SMPD1P17405 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMPD1P17405 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.08■□□□□ 0.8
SMPD1P17405 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMPD1P17405 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD1P17405 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.07■□□□□ 0.8
SMPD1P17405 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SMPD1P17405 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.07■□□□□ 0.8
SMPD1P17405 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD1P17405 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SMPD1P17405 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD1P17405 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.07■□□□□ 0.8
SMPD1P17405 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD1P17405 MED15P5-201ENST00000423150 992 ntBASIC20.07■□□□□ 0.8
SMPD1P17405 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.07■□□□□ 0.8
SMPD1P17405 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.07■□□□□ 0.8
SMPD1P17405 BX005266.1-201ENST00000473402 457 ntBASIC20.07■□□□□ 0.8
SMPD1P17405 AC105339.3-201ENST00000560043 636 ntBASIC20.07■□□□□ 0.8
SMPD1P17405 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD1P17405 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.07■□□□□ 0.8
SMPD1P17405 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.07■□□□□ 0.8
SMPD1P17405 FAM197Y3-203ENST00000618346 717 ntBASIC20.07■□□□□ 0.8
SMPD1P17405 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.07■□□□□ 0.8
SMPD1P17405 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SMPD1P17405 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD1P17405 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD1P17405 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
SMPD1P17405 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD1P17405 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD1P17405 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD1P17405 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.07■□□□□ 0.8
SMPD1P17405 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.06■□□□□ 0.8
SMPD1P17405 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
SMPD1P17405 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.06■□□□□ 0.8
SMPD1P17405 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms