Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RARAP10276 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.04■□□□□ 0.64
RARAP10276 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
RARAP10276 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RARAP10276 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 PRORSD1P-202ENST00000563365 2154 ntBASIC19.04■□□□□ 0.64
RARAP10276 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.04■□□□□ 0.64
RARAP10276 AC012306.2-201ENST00000609350 630 ntBASIC19.04■□□□□ 0.64
RARAP10276 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RARAP10276 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.04■□□□□ 0.64
RARAP10276 AC073912.3-201ENST00000624414 853 ntBASIC19.04■□□□□ 0.64
RARAP10276 AC133561.5-201ENST00000635547 218 ntBASIC19.04■□□□□ 0.64
RARAP10276 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RARAP10276 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 AC106820.2-201ENST00000563775 3264 ntBASIC19.03■□□□□ 0.64
RARAP10276 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RARAP10276 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.03■□□□□ 0.64
RARAP10276 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RARAP10276 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.03■□□□□ 0.64
RARAP10276 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARAP10276 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.03■□□□□ 0.64
RARAP10276 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RARAP10276 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RARAP10276 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.03■□□□□ 0.64
RARAP10276 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RARAP10276 AL024508.2-201ENST00000607749 1894 ntBASIC19.03■□□□□ 0.64
RARAP10276 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RARAP10276 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RARAP10276 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RARAP10276 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RARAP10276 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RARAP10276 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
RARAP10276 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.02■□□□□ 0.64
RARAP10276 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RARAP10276 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RARAP10276 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RARAP10276 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.02■□□□□ 0.64
RARAP10276 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RARAP10276 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.02■□□□□ 0.64
RARAP10276 AC012317.2-201ENST00000623305 2251 ntBASIC19.02■□□□□ 0.64
RARAP10276 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.02■□□□□ 0.64
RARAP10276 AC010203.1-204ENST00000548782 407 ntBASIC19.02■□□□□ 0.64
RARAP10276 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.02■□□□□ 0.64
RARAP10276 MIR3917-201ENST00000580971 93 ntBASIC19.02■□□□□ 0.64
RARAP10276 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RARAP10276 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
RARAP10276 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RARAP10276 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.02■□□□□ 0.63
RARAP10276 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RARAP10276 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.01■□□□□ 0.63
RARAP10276 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.01■□□□□ 0.63
RARAP10276 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RARAP10276 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RARAP10276 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.01■□□□□ 0.63
RARAP10276 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.01■□□□□ 0.63
RARAP10276 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 AC097493.4-201ENST00000641197 219 ntBASIC19.01■□□□□ 0.63
RARAP10276 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
RARAP10276 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.01■□□□□ 0.63
RARAP10276 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RARAP10276 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RARAP10276 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RARAP10276 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.01■□□□□ 0.63
RARAP10276 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RARAP10276 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RARAP10276 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms