Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.53□□□□□ -0.24
SMIM17P0DL12 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 NBPF21P-201ENST00000425093 1451 ntBASIC13.53□□□□□ -0.24
SMIM17P0DL12 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.53□□□□□ -0.24
SMIM17P0DL12 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SMIM17P0DL12 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
SMIM17P0DL12 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.52□□□□□ -0.24
SMIM17P0DL12 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM17P0DL12 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SMIM17P0DL12 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM17P0DL12 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.52□□□□□ -0.24
SMIM17P0DL12 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SMIM17P0DL12 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM17P0DL12 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.52□□□□□ -0.24
SMIM17P0DL12 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
SMIM17P0DL12 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM17P0DL12 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM17P0DL12 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM17P0DL12 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.52□□□□□ -0.25
SMIM17P0DL12 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM17P0DL12 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 HLA-A-209ENST00000638375 975 ntBASIC13.52□□□□□ -0.25
SMIM17P0DL12 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.52□□□□□ -0.25
SMIM17P0DL12 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM17P0DL12 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM17P0DL12 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM17P0DL12 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SMIM17P0DL12 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SMIM17P0DL12 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 AC008894.3-201ENST00000624324 3103 ntBASIC13.52□□□□□ -0.25
SMIM17P0DL12 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms