Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
LINGO3P0C6S8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 LINC02199-201ENST00000506655 2702 ntBASIC17.57■□□□□ 0.4
LINGO3P0C6S8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 BCL2-203ENST00000589955 5011 ntBASIC17.57■□□□□ 0.4
LINGO3P0C6S8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LINGO3P0C6S8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 RPS2P55-201ENST00000397318 883 ntBASIC17.56■□□□□ 0.4
LINGO3P0C6S8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 AC107956.1-201ENST00000494359 873 ntBASIC17.56■□□□□ 0.4
LINGO3P0C6S8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 AL445675.2-201ENST00000620291 557 ntBASIC17.56■□□□□ 0.4
LINGO3P0C6S8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 AL121761.2-201ENST00000598007 1648 ntBASIC17.56■□□□□ 0.4
LINGO3P0C6S8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 IRX1P1-201ENST00000438849 1838 ntBASIC17.56■□□□□ 0.4
LINGO3P0C6S8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINGO3P0C6S8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms