Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.04■□□□□ 0.48
PRAMEF1O95521 KRT18P35-201ENST00000510488 1269 ntBASIC18.04■□□□□ 0.48
PRAMEF1O95521 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.04■□□□□ 0.48
PRAMEF1O95521 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.04■□□□□ 0.48
PRAMEF1O95521 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEF1O95521 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.04■□□□□ 0.48
PRAMEF1O95521 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.04■□□□□ 0.48
PRAMEF1O95521 AL121956.5-201ENST00000625261 221 ntBASIC18.04■□□□□ 0.48
PRAMEF1O95521 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF1O95521 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PRAMEF1O95521 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF1O95521 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEF1O95521 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF1O95521 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEF1O95521 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF1O95521 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF1O95521 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF1O95521 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
PRAMEF1O95521 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF1O95521 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 IGHGP-201ENST00000390555 1178 ntBASIC18.03■□□□□ 0.48
PRAMEF1O95521 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 AL136038.3-201ENST00000561909 1096 ntBASIC18.03■□□□□ 0.48
PRAMEF1O95521 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 LINC00167-201ENST00000530583 1419 ntBASIC18.03■□□□□ 0.48
PRAMEF1O95521 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.03■□□□□ 0.48
PRAMEF1O95521 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF1O95521 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
PRAMEF1O95521 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PRAMEF1O95521 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.02■□□□□ 0.48
PRAMEF1O95521 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.02■□□□□ 0.48
PRAMEF1O95521 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.02■□□□□ 0.48
PRAMEF1O95521 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PRAMEF1O95521 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.02■□□□□ 0.48
PRAMEF1O95521 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.02■□□□□ 0.48
PRAMEF1O95521 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.02■□□□□ 0.48
PRAMEF1O95521 GPR32P1-201ENST00000601788 811 ntBASIC18.02■□□□□ 0.48
PRAMEF1O95521 AL445228.2-201ENST00000605589 952 ntBASIC18.02■□□□□ 0.48
PRAMEF1O95521 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF1O95521 AC004263.2-201ENST00000617183 678 ntBASIC18.02■□□□□ 0.48
PRAMEF1O95521 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEF1O95521 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEF1O95521 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEF1O95521 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEF1O95521 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.02■□□□□ 0.47
PRAMEF1O95521 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.01■□□□□ 0.47
PRAMEF1O95521 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.01■□□□□ 0.47
PRAMEF1O95521 HTR7P1-202ENST00000624664 4411 ntBASIC18.01■□□□□ 0.47
PRAMEF1O95521 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF1O95521 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PRAMEF1O95521 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF1O95521 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF1O95521 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF1O95521 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF1O95521 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms