Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.36■□□□□ 0.53
USP1O94782 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USP1O94782 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.36■□□□□ 0.53
USP1O94782 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 AC128688.1-201ENST00000487626 519 ntBASIC18.36■□□□□ 0.53
USP1O94782 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.36■□□□□ 0.53
USP1O94782 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.36■□□□□ 0.53
USP1O94782 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.36■□□□□ 0.53
USP1O94782 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.36■□□□□ 0.53
USP1O94782 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.36■□□□□ 0.53
USP1O94782 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.35■□□□□ 0.53
USP1O94782 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.35■□□□□ 0.53
USP1O94782 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.35■□□□□ 0.53
USP1O94782 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.35■□□□□ 0.53
USP1O94782 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 INGX-201ENST00000359239 846 ntBASIC18.35■□□□□ 0.53
USP1O94782 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.35■□□□□ 0.53
USP1O94782 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.35■□□□□ 0.53
USP1O94782 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.35■□□□□ 0.53
USP1O94782 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.35■□□□□ 0.53
USP1O94782 LINC01023-201ENST00000606054 436 ntBASIC18.35■□□□□ 0.53
USP1O94782 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 AL024508.2-201ENST00000607749 1894 ntBASIC18.35■□□□□ 0.53
USP1O94782 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
USP1O94782 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.35■□□□□ 0.53
USP1O94782 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.35■□□□□ 0.53
USP1O94782 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USP1O94782 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP1O94782 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USP1O94782 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
USP1O94782 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.34■□□□□ 0.53
USP1O94782 KRT8P9-201ENST00000558927 1449 ntBASIC18.34■□□□□ 0.53
USP1O94782 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.34■□□□□ 0.53
USP1O94782 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.34■□□□□ 0.53
USP1O94782 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 MMP23A-201ENST00000234610 1017 ntBASIC18.34■□□□□ 0.53
USP1O94782 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.34■□□□□ 0.53
USP1O94782 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.34■□□□□ 0.53
USP1O94782 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.34■□□□□ 0.53
USP1O94782 AC010240.3-201ENST00000607688 395 ntBASIC18.34■□□□□ 0.53
USP1O94782 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.34■□□□□ 0.53
USP1O94782 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.34■□□□□ 0.53
USP1O94782 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 AC009053.2-201ENST00000563701 2365 ntBASIC18.34■□□□□ 0.53
USP1O94782 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.34■□□□□ 0.53
USP1O94782 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USP1O94782 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP1O94782 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP1O94782 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
USP1O94782 CYP2D8P-201ENST00000433633 1490 ntBASIC18.33■□□□□ 0.53
USP1O94782 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.33■□□□□ 0.53
USP1O94782 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
USP1O94782 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.33■□□□□ 0.53
USP1O94782 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
USP1O94782 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
USP1O94782 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 AC211429.1-201ENST00000415277 523 ntBASIC18.33■□□□□ 0.52
USP1O94782 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.33■□□□□ 0.52
USP1O94782 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.33■□□□□ 0.52
USP1O94782 NAPSB-206ENST00000562112 1266 ntBASIC18.33■□□□□ 0.52
USP1O94782 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms