Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.66■□□□□ 0.58
TSPAN3O60637 KRT17P6-201ENST00000453795 1220 ntBASIC18.66■□□□□ 0.58
TSPAN3O60637 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TSPAN3O60637 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.66■□□□□ 0.58
TSPAN3O60637 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.66■□□□□ 0.58
TSPAN3O60637 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.66■□□□□ 0.58
TSPAN3O60637 Z69720.1-201ENST00000601483 472 ntBASIC18.66■□□□□ 0.58
TSPAN3O60637 AC138894.3-201ENST00000603787 634 ntBASIC18.66■□□□□ 0.58
TSPAN3O60637 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.66■□□□□ 0.58
TSPAN3O60637 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.66■□□□□ 0.58
TSPAN3O60637 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.66■□□□□ 0.58
TSPAN3O60637 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.66■□□□□ 0.58
TSPAN3O60637 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TSPAN3O60637 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.66■□□□□ 0.58
TSPAN3O60637 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TSPAN3O60637 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TSPAN3O60637 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
TSPAN3O60637 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TSPAN3O60637 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.66■□□□□ 0.58
TSPAN3O60637 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
TSPAN3O60637 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.65■□□□□ 0.58
TSPAN3O60637 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.65■□□□□ 0.58
TSPAN3O60637 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TSPAN3O60637 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.65■□□□□ 0.58
TSPAN3O60637 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TSPAN3O60637 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.65■□□□□ 0.58
TSPAN3O60637 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.65■□□□□ 0.58
TSPAN3O60637 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.65■□□□□ 0.58
TSPAN3O60637 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TSPAN3O60637 TPM4P1-201ENST00000436100 807 ntBASIC18.65■□□□□ 0.58
TSPAN3O60637 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.65■□□□□ 0.58
TSPAN3O60637 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.65■□□□□ 0.58
TSPAN3O60637 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.65■□□□□ 0.58
TSPAN3O60637 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.65■□□□□ 0.58
TSPAN3O60637 AC099336.1-202ENST00000602961 463 ntBASIC18.65■□□□□ 0.58
TSPAN3O60637 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.65■□□□□ 0.58
TSPAN3O60637 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.65■□□□□ 0.58
TSPAN3O60637 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
TSPAN3O60637 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TSPAN3O60637 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN3O60637 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TSPAN3O60637 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.64■□□□□ 0.57
TSPAN3O60637 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TSPAN3O60637 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TSPAN3O60637 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.64■□□□□ 0.57
TSPAN3O60637 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.64■□□□□ 0.57
TSPAN3O60637 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.64■□□□□ 0.57
TSPAN3O60637 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.64■□□□□ 0.57
TSPAN3O60637 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.64■□□□□ 0.57
TSPAN3O60637 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.64■□□□□ 0.57
TSPAN3O60637 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.64■□□□□ 0.57
TSPAN3O60637 AL732292.2-201ENST00000609649 430 ntBASIC18.64■□□□□ 0.57
TSPAN3O60637 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.64■□□□□ 0.57
TSPAN3O60637 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.64■□□□□ 0.57
TSPAN3O60637 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.64■□□□□ 0.57
TSPAN3O60637 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.64■□□□□ 0.57
TSPAN3O60637 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.64■□□□□ 0.57
TSPAN3O60637 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TSPAN3O60637 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.64■□□□□ 0.57
TSPAN3O60637 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TSPAN3O60637 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN3O60637 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TSPAN3O60637 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TSPAN3O60637 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms