Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LCMT2O60294 GPR32P1-201ENST00000601788 811 ntBASIC17.34■□□□□ 0.37
LCMT2O60294 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.34■□□□□ 0.37
LCMT2O60294 AC116407.4-201ENST00000623319 1061 ntBASIC17.34■□□□□ 0.37
LCMT2O60294 Z83836.1-201ENST00000624605 1642 ntBASIC17.34■□□□□ 0.37
LCMT2O60294 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCMT2O60294 AP000997.3-201ENST00000623333 2250 ntBASIC17.33■□□□□ 0.37
LCMT2O60294 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCMT2O60294 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCMT2O60294 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LCMT2O60294 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCMT2O60294 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCMT2O60294 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 AL353692.3-201ENST00000407031 1396 ntBASIC17.33■□□□□ 0.36
LCMT2O60294 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LCMT2O60294 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LCMT2O60294 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.33■□□□□ 0.36
LCMT2O60294 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.33■□□□□ 0.36
LCMT2O60294 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.33■□□□□ 0.36
LCMT2O60294 AL390719.2-201ENST00000606993 987 ntBASIC17.33■□□□□ 0.36
LCMT2O60294 AL358472.4-201ENST00000633140 710 ntBASIC17.33■□□□□ 0.36
LCMT2O60294 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.33■□□□□ 0.36
LCMT2O60294 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.33■□□□□ 0.36
LCMT2O60294 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LCMT2O60294 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LCMT2O60294 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LCMT2O60294 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.33■□□□□ 0.36
LCMT2O60294 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCMT2O60294 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LCMT2O60294 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.32■□□□□ 0.36
LCMT2O60294 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.32■□□□□ 0.36
LCMT2O60294 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LCMT2O60294 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.32■□□□□ 0.36
LCMT2O60294 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LCMT2O60294 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.32■□□□□ 0.36
LCMT2O60294 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LCMT2O60294 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.32■□□□□ 0.36
LCMT2O60294 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.32■□□□□ 0.36
LCMT2O60294 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.32■□□□□ 0.36
LCMT2O60294 AC011498.5-201ENST00000592027 486 ntBASIC17.32■□□□□ 0.36
LCMT2O60294 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.32■□□□□ 0.36
LCMT2O60294 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LCMT2O60294 AC138028.4-201ENST00000564984 1845 ntBASIC17.32■□□□□ 0.36
LCMT2O60294 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.32■□□□□ 0.36
LCMT2O60294 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
LCMT2O60294 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
LCMT2O60294 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.32■□□□□ 0.36
LCMT2O60294 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCMT2O60294 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.31■□□□□ 0.36
LCMT2O60294 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
LCMT2O60294 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.31■□□□□ 0.36
LCMT2O60294 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.31■□□□□ 0.36
LCMT2O60294 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.31■□□□□ 0.36
LCMT2O60294 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms