Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.03■■□□□ 1.28
ABCC4O15439 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.03■■□□□ 1.28
ABCC4O15439 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.03■■□□□ 1.28
ABCC4O15439 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.03■■□□□ 1.28
ABCC4O15439 AC104819.1-201ENST00000504587 486 ntBASIC23.03■■□□□ 1.28
ABCC4O15439 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.03■■□□□ 1.28
ABCC4O15439 AL160237.2-201ENST00000556165 472 ntBASIC23.03■■□□□ 1.28
ABCC4O15439 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.03■■□□□ 1.28
ABCC4O15439 AC074051.2-201ENST00000565115 352 ntBASIC23.03■■□□□ 1.28
ABCC4O15439 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
ABCC4O15439 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
ABCC4O15439 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC23.02■■□□□ 1.28
ABCC4O15439 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
ABCC4O15439 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC23.02■■□□□ 1.28
ABCC4O15439 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC23.02■■□□□ 1.28
ABCC4O15439 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
ABCC4O15439 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.02■■□□□ 1.28
ABCC4O15439 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.02■■□□□ 1.28
ABCC4O15439 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.02■■□□□ 1.28
ABCC4O15439 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.02■■□□□ 1.28
ABCC4O15439 AC008687.5-201ENST00000593746 558 ntBASIC23.02■■□□□ 1.28
ABCC4O15439 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
ABCC4O15439 GPR32P1-201ENST00000601788 811 ntBASIC23.02■■□□□ 1.28
ABCC4O15439 AC138894.3-201ENST00000603787 634 ntBASIC23.02■■□□□ 1.28
ABCC4O15439 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.02■■□□□ 1.28
ABCC4O15439 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ABCC4O15439 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCC4O15439 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCC4O15439 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ABCC4O15439 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCC4O15439 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC23.01■■□□□ 1.27
ABCC4O15439 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC23.01■■□□□ 1.27
ABCC4O15439 AC233702.3-201ENST00000578656 1387 ntBASIC23.01■■□□□ 1.27
ABCC4O15439 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCC4O15439 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.01■■□□□ 1.27
ABCC4O15439 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCC4O15439 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ABCC4O15439 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ABCC4O15439 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ABCC4O15439 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC23.01■■□□□ 1.27
ABCC4O15439 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCC4O15439 CD276-201ENST00000318424 2738 ntTSL 5 BASIC23.01■■□□□ 1.27
ABCC4O15439 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.01■■□□□ 1.27
ABCC4O15439 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ABCC4O15439 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC23.01■■□□□ 1.27
ABCC4O15439 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCC4O15439 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC23.01■■□□□ 1.27
ABCC4O15439 AC138028.4-201ENST00000564984 1845 ntBASIC23.01■■□□□ 1.27
ABCC4O15439 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC23■■□□□ 1.27
ABCC4O15439 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ABCC4O15439 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ABCC4O15439 AC007613.1-201ENST00000572811 2597 ntBASIC23■■□□□ 1.27
ABCC4O15439 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ABCC4O15439 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23■■□□□ 1.27
ABCC4O15439 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ABCC4O15439 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ABCC4O15439 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
ABCC4O15439 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
ABCC4O15439 FLJ13224-201ENST00000313737 1514 ntBASIC23■■□□□ 1.27
ABCC4O15439 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC23■■□□□ 1.27
ABCC4O15439 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
ABCC4O15439 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
ABCC4O15439 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
ABCC4O15439 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
ABCC4O15439 IGHGP-201ENST00000390555 1178 ntBASIC23■■□□□ 1.27
ABCC4O15439 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
ABCC4O15439 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23■■□□□ 1.27
ABCC4O15439 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23■■□□□ 1.27
ABCC4O15439 IGHV3-41-201ENST00000613121 348 ntBASIC23■■□□□ 1.27
ABCC4O15439 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ABCC4O15439 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23■■□□□ 1.27
ABCC4O15439 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC23■■□□□ 1.27
ABCC4O15439 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23■■□□□ 1.27
ABCC4O15439 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
ABCC4O15439 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
ABCC4O15439 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
ABCC4O15439 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.99■■□□□ 1.27
ABCC4O15439 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
ABCC4O15439 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
ABCC4O15439 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms