Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.98■□□□□ 0.31
AP3D1O14617 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 AC092338.2-201ENST00000568827 1415 ntBASIC16.98■□□□□ 0.31
AP3D1O14617 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.98■□□□□ 0.31
AP3D1O14617 TSPY17P-201ENST00000450329 467 ntBASIC16.98■□□□□ 0.31
AP3D1O14617 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.98■□□□□ 0.31
AP3D1O14617 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.98■□□□□ 0.31
AP3D1O14617 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
AP3D1O14617 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.98■□□□□ 0.31
AP3D1O14617 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.98■□□□□ 0.31
AP3D1O14617 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.98■□□□□ 0.31
AP3D1O14617 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.98■□□□□ 0.31
AP3D1O14617 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3D1O14617 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 AL139384.1-201ENST00000612143 3047 ntBASIC16.97■□□□□ 0.31
AP3D1O14617 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
AP3D1O14617 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.97■□□□□ 0.31
AP3D1O14617 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
AP3D1O14617 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.97■□□□□ 0.31
AP3D1O14617 AC007663.1-201ENST00000438948 1240 ntBASIC16.97■□□□□ 0.31
AP3D1O14617 CCR12P-201ENST00000446203 998 ntBASIC16.97■□□□□ 0.31
AP3D1O14617 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3D1O14617 C2orf69P3-201ENST00000565542 1120 ntBASIC16.97■□□□□ 0.31
AP3D1O14617 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3D1O14617 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
AP3D1O14617 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3D1O14617 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 ESPNP-201ENST00000270691 2015 ntBASIC16.97■□□□□ 0.31
AP3D1O14617 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP3D1O14617 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
AP3D1O14617 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.97■□□□□ 0.31
AP3D1O14617 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3D1O14617 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.96■□□□□ 0.31
AP3D1O14617 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.96■□□□□ 0.31
AP3D1O14617 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.96■□□□□ 0.31
AP3D1O14617 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.96■□□□□ 0.31
AP3D1O14617 CR769767.2-201ENST00000622735 460 ntBASIC16.96■□□□□ 0.31
AP3D1O14617 AC010947.1-201ENST00000623454 693 ntBASIC16.96■□□□□ 0.31
AP3D1O14617 GMCL1P1-201ENST00000463439 1581 ntBASIC16.96■□□□□ 0.31
AP3D1O14617 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
AP3D1O14617 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3D1O14617 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.96■□□□□ 0.3
AP3D1O14617 AC099343.3-201ENST00000605834 2503 ntBASIC16.96■□□□□ 0.3
AP3D1O14617 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP3D1O14617 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
AP3D1O14617 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.95■□□□□ 0.3
AP3D1O14617 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3D1O14617 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3D1O14617 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
AP3D1O14617 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.95■□□□□ 0.3
AP3D1O14617 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
AP3D1O14617 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3D1O14617 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
AP3D1O14617 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3D1O14617 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3D1O14617 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms