Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
HFM1A2PYH4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
HFM1A2PYH4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
HFM1A2PYH4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
HFM1A2PYH4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
HFM1A2PYH4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
HFM1A2PYH4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC26.7■■□□□ 1.87
HFM1A2PYH4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC26.7■■□□□ 1.86
HFM1A2PYH4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC26.7■■□□□ 1.86
HFM1A2PYH4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC26.7■■□□□ 1.86
HFM1A2PYH4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC26.7■■□□□ 1.86
HFM1A2PYH4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC26.7■■□□□ 1.86
HFM1A2PYH4 TP73-AS1-207ENST00000624167 988 ntBASIC26.7■■□□□ 1.86
HFM1A2PYH4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC26.7■■□□□ 1.86
HFM1A2PYH4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
HFM1A2PYH4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC26.7■■□□□ 1.86
HFM1A2PYH4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HFM1A2PYH4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HFM1A2PYH4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
HFM1A2PYH4 AL354751.1-201ENST00000412768 1863 ntBASIC26.7■■□□□ 1.86
HFM1A2PYH4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HFM1A2PYH4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC26.69■■□□□ 1.86
HFM1A2PYH4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
HFM1A2PYH4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HFM1A2PYH4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HFM1A2PYH4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HFM1A2PYH4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
HFM1A2PYH4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HFM1A2PYH4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HFM1A2PYH4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
HFM1A2PYH4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC26.69■■□□□ 1.86
HFM1A2PYH4 MIR5100-201ENST00000579544 119 ntBASIC26.69■■□□□ 1.86
HFM1A2PYH4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC26.69■■□□□ 1.86
HFM1A2PYH4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
HFM1A2PYH4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
HFM1A2PYH4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
HFM1A2PYH4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC26.69■■□□□ 1.86
HFM1A2PYH4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC26.68■■□□□ 1.86
HFM1A2PYH4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 FLJ13224-201ENST00000313737 1514 ntBASIC26.68■■□□□ 1.86
HFM1A2PYH4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
HFM1A2PYH4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC26.68■■□□□ 1.86
HFM1A2PYH4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC26.68■■□□□ 1.86
HFM1A2PYH4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC26.68■■□□□ 1.86
HFM1A2PYH4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC26.68■■□□□ 1.86
HFM1A2PYH4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC26.68■■□□□ 1.86
HFM1A2PYH4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC26.68■■□□□ 1.86
HFM1A2PYH4 AP001269.4-201ENST00000609611 512 ntBASIC26.68■■□□□ 1.86
HFM1A2PYH4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC26.68■■□□□ 1.86
HFM1A2PYH4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
HFM1A2PYH4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
HFM1A2PYH4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC26.67■■□□□ 1.86
HFM1A2PYH4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC26.67■■□□□ 1.86
HFM1A2PYH4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC26.67■■□□□ 1.86
HFM1A2PYH4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC26.67■■□□□ 1.86
HFM1A2PYH4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
HFM1A2PYH4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC26.67■■□□□ 1.86
HFM1A2PYH4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC26.67■■□□□ 1.86
HFM1A2PYH4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
HFM1A2PYH4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 AL020996.1-203ENST00000536896 2307 ntBASIC26.67■■□□□ 1.86
HFM1A2PYH4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
HFM1A2PYH4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HFM1A2PYH4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
HFM1A2PYH4 AC022898.2-201ENST00000616822 1312 ntBASIC26.66■■□□□ 1.86
HFM1A2PYH4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC26.66■■□□□ 1.86
HFM1A2PYH4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
HFM1A2PYH4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
HFM1A2PYH4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC26.66■■□□□ 1.86
HFM1A2PYH4 AC106795.1-205ENST00000512851 1056 ntBASIC26.66■■□□□ 1.86
HFM1A2PYH4 AF238378.1-201ENST00000526806 358 ntBASIC26.66■■□□□ 1.86
HFM1A2PYH4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC26.66■■□□□ 1.86
HFM1A2PYH4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC26.66■■□□□ 1.86
HFM1A2PYH4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC26.66■■□□□ 1.86
HFM1A2PYH4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
HFM1A2PYH4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC26.66■■□□□ 1.86
HFM1A2PYH4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC26.66■■□□□ 1.86
HFM1A2PYH4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC26.66■■□□□ 1.86
HFM1A2PYH4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
HFM1A2PYH4 AP000997.3-201ENST00000623333 2250 ntBASIC26.66■■□□□ 1.86
HFM1A2PYH4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms