Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 LINC00167-201ENST00000530583 1419 ntBASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 LINC00602-201ENST00000629776 2065 ntBASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC196A0A1B0GTZ2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 NOC2LP1-202ENST00000452600 2235 ntBASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 NTF6B-201ENST00000591913 560 ntBASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CCDC196A0A1B0GTZ2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC196A0A1B0GTZ2 AC132938.6-201ENST00000623828 1655 ntBASIC21.08■□□□□ 0.96
CCDC196A0A1B0GTZ2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CCDC196A0A1B0GTZ2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC196A0A1B0GTZ2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC196A0A1B0GTZ2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CCDC196A0A1B0GTZ2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
CCDC196A0A1B0GTZ2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 SPDYE13P-201ENST00000445314 798 ntBASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 AL136038.3-201ENST00000561909 1096 ntBASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 GPR32P1-201ENST00000601788 811 ntBASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 AL121956.5-201ENST00000625261 221 ntBASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC196A0A1B0GTZ2 AC022898.2-201ENST00000616822 1312 ntBASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 AL031133.1-201ENST00000406807 723 ntBASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 SLC25A6P5-201ENST00000435663 894 ntBASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC196A0A1B0GTZ2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms