Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC136632.2-201ENST00000512891 861 ntBASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC010460.3-201ENST00000511359 1579 ntBASIC22.97■■□□□ 1.27
LOC102724428A0A0B4J2F2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC096633.1-201ENST00000422446 749 ntBASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 KRT18P28-201ENST00000453838 1332 ntBASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 SIGLEC16-201ENST00000599858 1437 ntBASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.96■■□□□ 1.27
LOC102724428A0A0B4J2F2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.27
LOC102724428A0A0B4J2F2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 AC122714.2-201ENST00000502787 707 ntBASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 YBX1P5-201ENST00000509441 847 ntBASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 AL596442.2-201ENST00000610240 980 ntBASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.95■■□□□ 1.26
LOC102724428A0A0B4J2F2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 SPDYE21P-201ENST00000413323 827 ntBASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
LOC102724428A0A0B4J2F2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.93■■□□□ 1.26
LOC102724428A0A0B4J2F2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LOC102724428A0A0B4J2F2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LOC102724428A0A0B4J2F2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.93■■□□□ 1.26
LOC102724428A0A0B4J2F2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.93■■□□□ 1.26
LOC102724428A0A0B4J2F2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
LOC102724428A0A0B4J2F2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.93■■□□□ 1.26
LOC102724428A0A0B4J2F2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
LOC102724428A0A0B4J2F2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LOC102724428A0A0B4J2F2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms