Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 AC099398.1-201ENST00000567919 2776 ntBASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 GNAS-203ENST00000306120 1878 ntBASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 FAM8A6P-201ENST00000407496 1135 ntBASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 TSPY17P-201ENST00000450329 467 ntBASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 MIR4674-201ENST00000582457 87 ntBASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX49Q9Y6V7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 KRT18P38-201ENST00000449496 1282 ntBASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 AL359075.1-203ENST00000462729 1002 ntBASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 AC135776.1-201ENST00000319817 2481 ntBASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
DDX49Q9Y6V7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms