Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 AC132938.6-201ENST00000623828 1655 ntBASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 LINC00167-201ENST00000530583 1419 ntBASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGC4Q9Y5F7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 BX276092.5-203ENST00000456199 560 ntBASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 KRT8P26-201ENST00000534154 1276 ntBASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 AC093010.1-201ENST00000473625 1624 ntBASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 AC016734.2-201ENST00000624325 1377 ntBASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGC4Q9Y5F7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 ABALON-201ENST00000629058 1903 ntBASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms