Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 AC020763.4-201ENST00000623414 4170 ntBASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PCDHA4Q9UN74 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 NOC2LP1-202ENST00000452600 2235 ntBASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHA4Q9UN74 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 AC007613.1-201ENST00000572811 2597 ntBASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 TSPY22P-201ENST00000427496 604 ntBASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 KRT18P65-201ENST00000439811 1286 ntBASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA4Q9UN74 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHA4Q9UN74 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 TSPY12P-201ENST00000421279 868 ntBASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 AC009154.2-201ENST00000621177 724 ntBASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 AL358472.4-201ENST00000633140 710 ntBASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms