Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 GNAS-203ENST00000306120 1878 ntBASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 AC141586.5-201ENST00000624546 2050 ntBASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 AC018695.7-201ENST00000624587 2492 ntBASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 B3GAT3P1-201ENST00000471720 806 ntBASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 AC011506.1-201ENST00000474329 610 ntBASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 AL359736.2-201ENST00000621992 437 ntBASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 KRT8P45-201ENST00000414328 1447 ntBASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB4Q9UN71 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 AC022211.2-201ENST00000585075 2527 ntBASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 AC008040.2-201ENST00000461049 708 ntBASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB4Q9UN71 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms