Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SHROOM4Q9ULL8 TP73-AS1-210ENST00000637775 1455 ntBASIC34.34■■■■□ 3.09
SHROOM4Q9ULL8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC34.34■■■■□ 3.09
SHROOM4Q9ULL8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SHROOM4Q9ULL8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC34.34■■■■□ 3.09
SHROOM4Q9ULL8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
SHROOM4Q9ULL8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC34.34■■■■□ 3.09
SHROOM4Q9ULL8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 OR7E14P-202ENST00000530490 1290 ntBASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 AL138831.2-201ENST00000606564 490 ntBASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC34.33■■■■□ 3.09
SHROOM4Q9ULL8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC34.32■■■■□ 3.09
SHROOM4Q9ULL8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC34.32■■■■□ 3.09
SHROOM4Q9ULL8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC34.32■■■■□ 3.08
SHROOM4Q9ULL8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
SHROOM4Q9ULL8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC34.32■■■■□ 3.08
SHROOM4Q9ULL8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC34.32■■■■□ 3.08
SHROOM4Q9ULL8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
SHROOM4Q9ULL8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC34.32■■■■□ 3.08
SHROOM4Q9ULL8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
SHROOM4Q9ULL8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC34.32■■■■□ 3.08
SHROOM4Q9ULL8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC34.32■■■■□ 3.08
SHROOM4Q9ULL8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC34.32■■■■□ 3.08
SHROOM4Q9ULL8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 ANO7L1-203ENST00000602586 1720 ntBASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 AL035633.1-201ENST00000406139 838 ntBASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 AC092910.1-201ENST00000482027 1129 ntBASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 AC011467.2-201ENST00000598425 242 ntBASIC34.31■■■■□ 3.08
SHROOM4Q9ULL8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC34.3■■■■□ 3.08
SHROOM4Q9ULL8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
SHROOM4Q9ULL8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 AP005117.1-201ENST00000584346 1413 ntBASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM4Q9ULL8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
SHROOM4Q9ULL8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC34.27■■■■□ 3.08
SHROOM4Q9ULL8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC34.27■■■■□ 3.08
SHROOM4Q9ULL8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC34.27■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms