Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 RPS2P28-201ENST00000314255 741 ntBASIC20.57■□□□□ 0.88
FBXO40Q9UH90 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 PMS2P1-201ENST00000431037 1228 ntBASIC20.57■□□□□ 0.88
FBXO40Q9UH90 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 AC023511.2-201ENST00000618803 211 ntBASIC20.57■□□□□ 0.88
FBXO40Q9UH90 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.57■□□□□ 0.88
FBXO40Q9UH90 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FBXO40Q9UH90 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FBXO40Q9UH90 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 AC005082.1-201ENST00000413042 2259 ntBASIC20.55■□□□□ 0.88
FBXO40Q9UH90 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 AF228730.7-201ENST00000641842 219 ntBASIC20.55■□□□□ 0.88
FBXO40Q9UH90 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FBXO40Q9UH90 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 AC097374.2-201ENST00000618617 1306 ntBASIC20.54■□□□□ 0.88
FBXO40Q9UH90 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 AC139887.3-201ENST00000568585 713 ntBASIC20.54■□□□□ 0.88
FBXO40Q9UH90 AC117500.6-201ENST00000624871 588 ntBASIC20.54■□□□□ 0.88
FBXO40Q9UH90 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.54■□□□□ 0.88
FBXO40Q9UH90 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms