Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 AL049597.2-201ENST00000565575 961 ntBASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 NTF6B-201ENST00000591913 560 ntBASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 KRT18P55-202ENST00000578578 1546 ntBASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 LINC01238-205ENST00000567549 1107 ntBASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BLOC1S4Q9NUP1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
BLOC1S4Q9NUP1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 AC005332.3-201ENST00000589904 676 ntBASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 AL390719.2-201ENST00000606993 987 ntBASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms