Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 WIZP1-201ENST00000531444 2299 ntBASIC17.11■□□□□ 0.33
KLHL1Q9NR64 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 HBZP1-201ENST00000354915 429 ntBASIC17.11■□□□□ 0.33
KLHL1Q9NR64 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 HCG4P8-203ENST00000443049 980 ntBASIC17.11■□□□□ 0.33
KLHL1Q9NR64 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.11■□□□□ 0.33
KLHL1Q9NR64 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.11■□□□□ 0.33
KLHL1Q9NR64 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 AL390961.4-201ENST00000623958 2535 ntBASIC17.11■□□□□ 0.33
KLHL1Q9NR64 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 Z98044.1-201ENST00000632503 1764 ntBASIC17.1■□□□□ 0.33
KLHL1Q9NR64 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 SPDYE13P-201ENST00000445314 798 ntBASIC17.1■□□□□ 0.33
KLHL1Q9NR64 SEC1P-202ENST00000473944 940 ntBASIC17.1■□□□□ 0.33
KLHL1Q9NR64 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 CROCCP1-201ENST00000426910 5675 ntBASIC17.1■□□□□ 0.33
KLHL1Q9NR64 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 AC093525.10-201ENST00000625130 1569 ntBASIC17.1■□□□□ 0.33
KLHL1Q9NR64 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KLHL1Q9NR64 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 AL645929.1-201ENST00000420084 975 ntBASIC17.09■□□□□ 0.33
KLHL1Q9NR64 KRT18P23-201ENST00000435622 1283 ntBASIC17.09■□□□□ 0.33
KLHL1Q9NR64 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 AL157888.1-201ENST00000631930 593 ntBASIC17.09■□□□□ 0.33
KLHL1Q9NR64 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL1Q9NR64 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms