Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.77■□□□□ 0.59
HPS4Q9NQG7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HPS4Q9NQG7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
HPS4Q9NQG7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
HPS4Q9NQG7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 AC120498.9-201ENST00000339021 3867 ntBASIC18.76■□□□□ 0.59
HPS4Q9NQG7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 AC113404.2-201ENST00000507884 177 ntBASIC18.76■□□□□ 0.59
HPS4Q9NQG7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 AC009102.3-201ENST00000623118 1491 ntBASIC18.76■□□□□ 0.59
HPS4Q9NQG7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPS4Q9NQG7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.75■□□□□ 0.59
HPS4Q9NQG7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPS4Q9NQG7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 MIR5100-201ENST00000579544 119 ntBASIC18.74■□□□□ 0.59
HPS4Q9NQG7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.74■□□□□ 0.59
HPS4Q9NQG7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 SDHAP2-201ENST00000455183 2001 ntBASIC18.73■□□□□ 0.59
HPS4Q9NQG7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms