Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRCC1Q9NPI7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRCC1Q9NPI7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRCC1Q9NPI7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.7■□□□□ 0.26
KRCC1Q9NPI7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRCC1Q9NPI7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRCC1Q9NPI7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRCC1Q9NPI7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 KRT18P29-201ENST00000397031 1267 ntBASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 HOXB1-202ENST00000577092 1414 ntBASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 LINC00896-202ENST00000609602 2128 ntBASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRCC1Q9NPI7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 CRYGFP-201ENST00000418459 633 ntBASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 AC036111.1-201ENST00000533973 1582 ntBASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRCC1Q9NPI7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 KRT18P23-201ENST00000435622 1283 ntBASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 AL355355.2-201ENST00000442321 338 ntBASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 MIR4651-201ENST00000582622 73 ntBASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 ITM2C-210ENST00000620962 501 ntBASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.67■□□□□ 0.26
KRCC1Q9NPI7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms