Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD248Q9HCU0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.07■□□□□ 0.64
CD248Q9HCU0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD248Q9HCU0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD248Q9HCU0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CD248Q9HCU0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD248Q9HCU0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD248Q9HCU0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CD248Q9HCU0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.07■□□□□ 0.64
CD248Q9HCU0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
CD248Q9HCU0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.07■□□□□ 0.64
CD248Q9HCU0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD248Q9HCU0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD248Q9HCU0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.07■□□□□ 0.64
CD248Q9HCU0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 HCG4P8-203ENST00000443049 980 ntBASIC19.06■□□□□ 0.64
CD248Q9HCU0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 NPAP1P7-201ENST00000613027 823 ntBASIC19.06■□□□□ 0.64
CD248Q9HCU0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 AC046158.3-201ENST00000624947 2558 ntBASIC19.06■□□□□ 0.64
CD248Q9HCU0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.06■□□□□ 0.64
CD248Q9HCU0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD248Q9HCU0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 CLEC4GP1-201ENST00000596555 870 ntBASIC19.05■□□□□ 0.64
CD248Q9HCU0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 KRT8P3-201ENST00000519669 1449 ntBASIC19.05■□□□□ 0.64
CD248Q9HCU0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.05■□□□□ 0.64
CD248Q9HCU0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD248Q9HCU0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CD248Q9HCU0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms