Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
UPF2Q9HAU5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
UPF2Q9HAU5 AC108860.2-201ENST00000562760 2183 ntBASIC22.31■■□□□ 1.16
UPF2Q9HAU5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 MCCD1P1-208ENST00000445732 328 ntBASIC22.3■■□□□ 1.16
UPF2Q9HAU5 FAM207BP-201ENST00000447172 505 ntBASIC22.3■■□□□ 1.16
UPF2Q9HAU5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 AC026366.1-201ENST00000488803 879 ntBASIC22.3■■□□□ 1.16
UPF2Q9HAU5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 AC233263.1-201ENST00000578059 224 ntBASIC22.3■■□□□ 1.16
UPF2Q9HAU5 AC110285.5-201ENST00000611501 352 ntBASIC22.3■■□□□ 1.16
UPF2Q9HAU5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
UPF2Q9HAU5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 AL031985.4-201ENST00000642138 673 ntBASIC22.29■■□□□ 1.16
UPF2Q9HAU5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 KRT16P1-201ENST00000399124 1418 ntBASIC22.29■■□□□ 1.16
UPF2Q9HAU5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 KRT8P50-201ENST00000562022 1438 ntBASIC22.29■■□□□ 1.16
UPF2Q9HAU5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC22.29■■□□□ 1.16
UPF2Q9HAU5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 RPS2P4-201ENST00000476944 856 ntBASIC22.28■■□□□ 1.16
UPF2Q9HAU5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.28■■□□□ 1.16
UPF2Q9HAU5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 PCDHA12-202ENST00000613593 2588 ntBASIC22.28■■□□□ 1.16
UPF2Q9HAU5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UPF2Q9HAU5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC22.27■■□□□ 1.16
UPF2Q9HAU5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
UPF2Q9HAU5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UPF2Q9HAU5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
UPF2Q9HAU5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC22.27■■□□□ 1.16
UPF2Q9HAU5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.27■■□□□ 1.16
UPF2Q9HAU5 AC124016.1-201ENST00000609552 612 ntBASIC22.27■■□□□ 1.16
UPF2Q9HAU5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UPF2Q9HAU5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
UPF2Q9HAU5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.27■■□□□ 1.16
UPF2Q9HAU5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UPF2Q9HAU5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC22.27■■□□□ 1.15
UPF2Q9HAU5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
UPF2Q9HAU5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
UPF2Q9HAU5 KRT18P55-202ENST00000578578 1546 ntBASIC22.26■■□□□ 1.15
UPF2Q9HAU5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF2Q9HAU5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms