Protein–RNA interactions for Protein: Q9H5V9

CXorf56, UPF0428 protein CXorf56, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf56Q9H5V9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.71■□□□□ 0.43
CXorf56Q9H5V9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CXorf56Q9H5V9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.71■□□□□ 0.42
CXorf56Q9H5V9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CXorf56Q9H5V9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CXorf56Q9H5V9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CXorf56Q9H5V9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 AC141586.3-201ENST00000562166 1838 ntBASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 UNC93B4-201ENST00000505679 747 ntBASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 CYP2T3P-201ENST00000601990 817 ntBASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXorf56Q9H5V9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 AC060766.5-201ENST00000590539 871 ntBASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 AC073648.6-201ENST00000641589 218 ntBASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CXorf56Q9H5V9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 MCRIP2P1-201ENST00000394346 511 ntBASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXorf56Q9H5V9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms