Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFAQ9H3P2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NELFAQ9H3P2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.21■□□□□ 0.19
NELFAQ9H3P2 GMCL1P1-201ENST00000463439 1581 ntBASIC16.21■□□□□ 0.18
NELFAQ9H3P2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NELFAQ9H3P2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
NELFAQ9H3P2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NELFAQ9H3P2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.21■□□□□ 0.18
NELFAQ9H3P2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 AC135776.1-201ENST00000319817 2481 ntBASIC16.2■□□□□ 0.18
NELFAQ9H3P2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 STARP1-201ENST00000397973 869 ntBASIC16.2■□□□□ 0.18
NELFAQ9H3P2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.2■□□□□ 0.18
NELFAQ9H3P2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 AL359075.1-203ENST00000462729 1002 ntBASIC16.2■□□□□ 0.18
NELFAQ9H3P2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 AL157888.1-201ENST00000631930 593 ntBASIC16.2■□□□□ 0.18
NELFAQ9H3P2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFAQ9H3P2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 SDHAP2-201ENST00000455183 2001 ntBASIC16.19■□□□□ 0.18
NELFAQ9H3P2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 AC093677.2-201ENST00000600169 1863 ntBASIC16.19■□□□□ 0.18
NELFAQ9H3P2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 HOMER2P1-201ENST00000455653 964 ntBASIC16.19■□□□□ 0.18
NELFAQ9H3P2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 RASA4DP-201ENST00000460726 1199 ntBASIC16.19■□□□□ 0.18
NELFAQ9H3P2 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFAQ9H3P2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 ESPNP-201ENST00000270691 2015 ntBASIC16.18■□□□□ 0.18
NELFAQ9H3P2 NFIC-211ENST00000641145 8399 ntBASIC16.18■□□□□ 0.18
NELFAQ9H3P2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms