Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 AC012618.2-201ENST00000428058 849 ntBASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 AL353719.1-201ENST00000566847 864 ntBASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 REXO1L10P-201ENST00000615707 1290 ntBASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 REXO1L12P-201ENST00000622156 912 ntBASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHACTR1Q9C0D0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 PRORSD1P-201ENST00000295112 541 ntBASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 AP001412.1-201ENST00000608405 714 ntBASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 AC141586.5-201ENST00000624546 2050 ntBASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PHACTR1Q9C0D0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PHACTR1Q9C0D0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PHACTR1Q9C0D0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PHACTR1Q9C0D0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 ABHD17AP1-201ENST00000358206 933 ntBASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 CRYGFP-201ENST00000418459 633 ntBASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 AP003041.3-201ENST00000527151 707 ntBASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 AC142381.4-202ENST00000563973 229 ntBASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 AC008687.5-201ENST00000593746 558 ntBASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 AC112497.1-201ENST00000624824 639 ntBASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 AC009053.2-201ENST00000563701 2365 ntBASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHACTR1Q9C0D0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms